Unlocking the genetic mysteries behind plant adaptation: New insights into the evolution of a water-saving trait in the pineapple family (bromeliaceae)

Some plant species have evolved a water-saving trait called Crassulacean Acid Metabolism (CAM). CAM plants like most Tillandsia species -- the most species-rich genus in the pineapple family (Bromeliaceae) -- optimise their water use efficiency: While other plants normally open their stomata (tiny pores in their leaves) during the day to absorb carbon dioxide for photosynthesis, CAM plants do this at night and stash CO₂ away for later use, helping them survive with less water. This trait evolved independently several times across the plant kingdom. However, the evolution of the complex genetic basis of CAM has remained elusive, making it a focus of research in evolutionary biology.

Gene Regulation is Key

In this study, the research team focused on a Tillandsia species pair exhibiting divergent forms of photosynthetis- CAM vs. C3 -- meaning that the C3-species lacks the specialized adaptation to arid conditions. By using advanced techniques to study the plants' genetics and biochemistry -- e.g. analyses of gene arrangements, molecular and gene family evolution, temporal differential gene expression and metabolites -- they discovered that changes in gene regulation are mainly responsible for genomic mechanisms driving CAM evolution in Tillandsia.

Clara Groot Crego, Department of Botany and Biodiversity Research at University of Vienna and lead author of the study, explains: "Our findings reveal that while large-scale changes have influenced Tillandsia's genomes like other plants, the adjustment of how photosynthesis works mainly happens through how genes are regulated -- not by changing the sequences that code for proteins." Key insights from the study, funded by the Austrian Science Fund (FWF) and the University of Vienna, include the identification of CAM-related gene families undergoing accelerated expansion in CAM species. This highlights the critical role of gene family evolution in generating novel variation that drives CAM evolution.

Into New Niches by Repeated Evolution

"CAM repeatedly evolved in different Tillandsia species and has accelerated their ability to colonize new ecological niches, serving as a key driver of the rampant speciation observed within this group," says Ovidiu Paun, Department of Botany and Biodiversity Research at University of Vienna and principal investigator of the study. "Our research highlights the potential importance of genetic innovation, beyond mere base pair changes, in driving ecological diversification," Paun adds.

Thibault Leroy, principal investigator from INRAE Toulouse, France, emphasizes that this study has implications beyond basic science. "Understanding how CAM evolved can help develop strategies to make crops more resilient to water shortages and cope with climate change."

The research will be extended across more species of this and other plant groups in the framework of a newly collaborative project jointly funded by the Austrian Science Fund (FWF) and the French National Agency for Research (ANR).