Germs, humans and numbers: New estimate revises our microbiome numbers downwards

The bacteria living in our bodies are important for our health. The makeup of each person's microbiome plays a role in both the tendency to become obese and in each individual's reaction to drugs. Some scientists have begun referring to it as the "second genome," recognizing that it needs to be taken into account when treating patients.

The rising importance of the microbiome in current scientific research led the Weizmann Institute's Prof. Ron Milo, Dr. Shai Fuchs and research student Ron Sender to revisit the common wisdom concerning the ratio of "personal" bacteria to human cells.

Their research was undertaken as part of their work for the book Cell Biology by the Numbers, which was recently published by Milo and Prof. Rob Philips of the California Institute of Technology. The book, as the name suggests, is a compilation of insights gained from calculations and estimates about living cells.

The original estimate that bacterial cells outnumber human cells in the body by ten to one was based on, among other things, the assumption that the average bacterium is about 1,000 times smaller than the average human cell. The problem with this estimate is that human cells vary widely in size, as do bacteria. For example, red blood cells are at least 100 times smaller than fat or muscle cells, and the microbes in the large intestine are about four times the size of the often-used "standard" bacterial cell volume. The Weizmann Institute scientists weighted their computations by the numbers of the different-sized human cells, as well as those of the various microbiome cells. They also weighted their calculations for the quantities of "guest" bacteria in different organs in the body. For example, the bacteria in the large intestine dominate, in terms of overall numbers, all the other organs combined.

Milo says, "It is truly important to understand our microbiome, and research into this fascinating field is crucial for biomedical research. In the life sciences, which involve "messy" highly dynamic and variable systems, researchers sometimes tend to rely on qualitative rather than quantitative statements. But performing educated estimates in cell biology can serve as an extremely powerful tool. For those researchers who are proficient at hearing what the numbers tell them, estimates serve as a 'sixth sense' for understanding the lives of cells."